DNA-microarray genotyping using oligonucleotide linker of carbodiimides for N-acetyltransferase2 polymorphism on anti-tuberculosis drug-induced hepatotoxicity

K. Dobashi, Y. Shimizu, A. Ono, M. Utsugi, T. Kawada, T. Hisada, T. Ishizuka, M. Mori (Maebashi, Japan)

Source: Annual Congress 2005 - Biological and treatment aspects of tuberculosis
Session: Biological and treatment aspects of tuberculosis
Session type: Poster Discussion
Number: 2896
Disease area: Respiratory infections

Congress or journal article abstract

Abstract

N-acetyltransferase2 (NAT2) is key enzyme of tuberculosis drug of Isoniazide (INH). Tuberculosis patients taking variety of drugs including INH have a risk of hepatotoxicity. Therefore, prediction of INH-induced hepatotoxicity is contributes to prevention of drug-induced adverse effect. Genotyping using a novel oligonucleotide–based DNA microarray for NAT2 polymorphysm is useful for clinical application. In this study, we developed a novel oligonucleotide based DNA microarray for NAT2 genotyping using recently developed technology of attachment of oligonucleotide probes to poly carbodiimido-coated glass slide reported that which could yield stronger hybridization signal and better specificity than the widely used aminosilane slides. To evaluate the validity of the microarray, NAT2 mutation-inserted clones and 42 tuberculosis patient genomes were applied to two methods of the microarray and RFLP. Results of genotyping by these two methods were corresponding. Furthermore, analysis of relationship between NAT2 phenotype determined by DNA-microarray and the risk of INH-induced hepatotoxicity revealed that slow-acetylator has significantly higher risk as previously reported. These findings indicate that this powerful tool is useful for clinical use for prediction of drug adverse effect.


Rating: 0
You must login to grade this presentation.

Share or cite this content

Citations should be made in the following way:
K. Dobashi, Y. Shimizu, A. Ono, M. Utsugi, T. Kawada, T. Hisada, T. Ishizuka, M. Mori (Maebashi, Japan). DNA-microarray genotyping using oligonucleotide linker of carbodiimides for N-acetyltransferase2 polymorphism on anti-tuberculosis drug-induced hepatotoxicity. Eur Respir J 2005; 26: Suppl. 49, 2896

You must login to share this Presentation/Article on Twitter, Facebook, LinkedIn or by email.

Member's Comments

No comment yet.
You must Login to comment this presentation.


Related content which might interest you:
N-acetyltransferase 2 and CYP2E1 polymorphisms do not increase the risk of antituberculosis drug-induced hepatotoxicity in caucasian population
Source: Annual Congress 2008 - Epidemiological and clinical aspects of tuberculosis control
Year: 2008


NAT2 genotyping individualization of isoniazid treatment
Source: Annual Congress 2010 - Scientific advances in tuberculosis
Year: 2010

Detection of isoniazid resistance mutations in Mycobacterium tuberculosis by use of sequencing, PCR-RFLP and TaqMan probes
Source: Annual Congress 2010 - Tuberculosis drug resistance
Year: 2010

Association between N-acetyltransferase 2 polymorphism and antituberculosis drug-induced liver injury risk: a meta-analysis
Source: International Congress 2017 – Human susceptibility to tuberculosis
Year: 2017

Determination of the six polymorphisms in the NAT2 gene helps to predict isoniazid side effects.
Source: Virtual Congress 2021 – Immunological and molecular characterisation of tuberculosis disease and infection
Year: 2021


Risk of antituberculosis drug (ATD)-induced hepatotoxicity and polymorphisms at the glutatione S-transferase (GST) loci (GSTM1 and GSTT1)
Source: Eur Respir J 2006; 28: Suppl. 50, 342s
Year: 2006

The influence phenotype of hydroxylation on anti-tuberculosis drug-induced hepatotoxicity
Source: Eur Respir J 2006; 28: Suppl. 50, 505s
Year: 2006

Detection of rifampin resistance mutations in Mycobacterium tuberculosis by use of sequencing, molecular beacons and taqman probes
Source: Annual Congress 2009 - Diagnostic advances in tuberculosis
Year: 2009


Detection of fluoroquinolone resistance associated mutations in Mycobacterium tuberculosis by use of sequencing and TaqMan probes
Source: Annual Congress 2012 - Microbiological advances in the diagnosis of tuberculosis
Year: 2012

Progression towards the development of the universal highly discriminative panel of VNTR loci for mycobacterium tuberculosis genotyping
Source: Eur Respir J 2006; 28: Suppl. 50, 525s
Year: 2006

Evaluation of ANXA11 rs1049550 SNP linkage with sarcoidosis susceptibility
Source: Annual Congress 2012 - Sarcoidosis
Year: 2012



Genetic polymorphism of epoxide hydrolase and GSTM1 in lung cancer susceptibility
Source: Eur Respir J 2002; 20: Suppl. 38, 229s
Year: 2002

Relationship of interleukin 10 1082 G/A gene polymorphism with the duration of nephrotoxic onset due to anti tuberculosis drugs in multi drug resistant tuberculosis patients
Source: International Congress 2019 – Tuberculosis: diagnosis
Year: 2019


Genetic GST and NAT polymorphism and diisocyanate-induced asthma
Source: Eur Respir J 2001; 18: Suppl. 33, 2s
Year: 2001

Deep amplicon sequencing for culture-free prediction of susceptibility or resistance to 13 anti-tuberculous drugs
Source: Eur Respir J, 57 (3) 2002338; 10.1183/13993003.02338-2020
Year: 2021



Genetic polymorphism of NAT-2 gene in adolescents with variable course of infiltrative tuberculosis
Source: Eur Respir J 2007; 30: Suppl. 51, 131s
Year: 2007

Biochip analysis of xenobiotic-metabolizing gene polymorphisms in children with bronchial asthma
Source: Annual Congress 2009 - New results in molecular pathology and functional genomics of non-neoplastic lung diseases
Year: 2009

Predicting the efficiency of the treatment of drug-resistant tuberculosis depending on the polymorphism variation of glutathione-S-transferase genes
Source: International Congress 2019 – Tuberculosis: diagnosis
Year: 2019

TNF-α promoter polymorphisms analysis in the susceptibility to beryllium-hypersensitivity
Source: Eur Respir J 2003; 22: Suppl. 45, 186s
Year: 2003

Rapid detection of M. tuberculosis gene mutations associated with drug resistance by modified allele-specific real-time PCR
Source: Eur Respir J 2006; 28: Suppl. 50, 589s
Year: 2006